Showing posts with label ISGC 2008. Show all posts
Showing posts with label ISGC 2008. Show all posts

Tuesday, April 29, 2008

Official Group Photo: International Symposium on Grid Computing (ISGC 2008), Taipei, Taiwan

Photo Caption: Participants in the International Symposium on Grid Computing (ISGC 2008) held on 7-11 April 2008 in Academia Sinica, Taipei, Taiwan. Source: http://event.twgrid.org/isgc2008/

Note: Click on the photo to see a larger view.

Sunday, April 13, 2008

Wine, Roses, Music, and Food -- ISGC 2008 Banquet At The Sherwood Hotel, Taipei, Taiwan



ISGC 2008
International Symposium on Grid Computing
Academia Sinica, Taipei, Taiwan
April 7 - 11, 2008


BANQUET AT THE SHERWOOD HOTEL (TAIPEI)
11 April 2008
Note: Click on the following link to view photos (choose slide show).
Cheers,
in Taipei, Taiwan
13 April 2008

My Photos In The International Symposium On Grid Computing (ISGC 2008), Taipei, Taiwan


Shown above are my photos during the Kick-off Meeting of the EUAsiaGrid Project in the International Symposium on Grid Computing (ISGC 2008), Taipei, Taiwan. Photos taken by Dr. Yannick Legre (President of HealthGrid) using his Nikon digital camera on April 8, 2008.

Thank you very much Yannick :)

Friday, April 11, 2008

Closing Ceremony: International Symposium On Grid Computing (ISGC 2008), Taipei, Taiwan


(a) Dr. Simon LIN


(b) Dr. Ludek MATYSKA



ISGC 2008
Academia Sinica, Taipei, Taiwan
11 April 2008

(17:30 - 18:15)

Closing Ceremony & Speech

Chair:

Simon C. LIN (Academia Sinica, Taiwan)

Closing Speech:

"European Grid Initiative -- Current Status"
Ludek MATYSKA (CESNET, Czhekoslovakia)

Grid Applications In Biomedicine And Life Sciences II : International Symposium On Grid Computing (ISGC 2008), Taipei, Taiwan


(a)


(b)

(c)


(d)

Photo Captions:

(a) Peter RICE
(b) Kao-Cheng YIN
(c) Francois GREY
(d) Yannick LEGRE



Application – Biomedicine and Life Sciences II

Chair: Peter RICE (European Bioinformatics Institute, United Kingdom)

Speakers:

"A Grid-based Medical Decision Support System"
Kao-Cheng YIN (Feng Chia University, Taiwan)

"Tackling Humanitarian Challenges with Citizen Cyberscience"
Francois GREY (CERN, Switzerland)

"SHARE: A Roadmap for Wide Adoption and Deployment of Grid Technology for Health in Europe"
Yannick LEGRE (Healthgrid, France)

Thursday, April 10, 2008

Grid Applications in Biomedicine And Life Sciences I : International Symposium On Grid Computing (ISGC 2008), Taipei, Taiwan


(a)

(b)

(c)

(d)

(Top to Bottom)

(a) Julius Pukacki
(b) Mason Hsiung
(c) Sigfried Benckner
(d) Anette Weisbecker


ISGC 2008
Academia Sinica, Taipei, Taiwan
11 April 2008

14:10 - 15:40

Application – Biomedicine and Life Sciences I


Chair: Yannick LEGRE (Healthgrid, France)

Speakers:

"Secure grid services for cooperative work in medicine and life science"
Anette WEISBECKER (Fraunhofer IAO, Germany)

"The @neurIST Biomedical Grid Infrastructure"
Siegfried BENKNER (University of Vienna, Austria)

"Virtual Screening Service Based on Grid Application Platform"
Mason HSIUNG (ASGC, Taiwan)

"Grid Technologies for Cancer Research in the ACGT Project"
Juliusz PUKACKI (Poznan Supercomputing and Networking Center, Poland)

Grid Activities in Asia Pacific: International Symposium On Grid Computing (ISGC 2008), Taipei, Taiwan


(a) Dr. Marco PAGANINI (Italy) - Chair




(b) LEE (Singapore)






(c) VANNARAT (Thailand)




(d) SUHARDAMIN (Thailand)



(e) BABILONIA (Philippines)




ISGC 2008
Academia Sinica,

Grid Activities in Asia Pacific III

Chair: Marco PAGANONI (INFN, Italy)

Speakers:

"Grid Services Provisioning"
Hing-Yen LEE, (NGO, Singapore) (remotely)

"Computing and Information Grid Development in Thailand"
Sornthep Sornthep VANNARAT (NECTEC, Thailand)

"GRID Initiatives in Indonesia"
Basuki SUHARDIMAN (ITB, Indonesia)

"Grid Activities in the Philippines through the Philippine e-Science Grid Program"
Rey Vincent P. BABILONIA (ASTI, Philippines)

Melvin Koh (Sun Microsystems, Singapore) On Grid and Cloud Computing: ISGC 2008, Taipei, Taiwan

Photo caption: Melvin Koh of Sunmicrosystems (Singapore) is shown giving a talk during the Industry Session of the International Symposium on Grid Computing (ISGC 2008), 11 April 2008, Academia Sinica, Taipei, Taiwan. Photo taken by Raffy Saldaña(http://raffysaldana.blogspot.com)



ISGC 2008

Academia Sinica, Taipei, Taiwan

11 April 2008



Melvin Koh
Senior Techinal Specialist
Global Systems Practice

Sun Microsystems, Singapore


Topic:


"On-Demand Computing using Network.com
Network.com
Utility based infrastructure and Application Services"


Vision:

Reliable
Scalable
Multi-source
Multi-tenancy
Predictable pricing
Standard infrastructure

Dr. Moon Kim (IBM, USA) On Grid and Cloud Computing: ISGC 2008, Taipei, Taiwan

Photo caption: Dr. Moon Kim of IBM (USA) is shown giving a talk during the Industry Session of the International Symposium on Grid Computing (ISGC 2008), 11 April 2008, Academia Sinica, Taipei, Taiwan. Photo taken by Raffy Saldaña (http://raffysaldana.blogspot.com/)


ISGC 2008

Academia, Sinica, Taipie, Taiwan

11 April 2008


Industry Session


Moon J. Kim

IBM Senior Technical Staff Member

Chief Architect and Master Innovator

moonkim "at" us.ibm.com

Grid Motivations

Accelerate Business Processes
- Faster, more accurate decision making
Productivity and Collaboration
- Access to distributed data, information insight
IT Optimization
- Improve
Accelerate. Collaborate. Optimize
IBM: 45, 000 developers
Server Grid Infrastructure
Grid services
Grid management center
Grid resource controller
Virtual Storage
Data Grid
Content Delivery
Cloud Computing
A cloud is a pool
Vietnam Ministry Leverages Cloud to Run Innovation Program

CNGrid Team

Dr. Fabrizio Gagliardi (Microsoft, USA) On Grid and Cloud Computing (ISGC 2008)

Photo caption: Dr. Fabrizio Gagliardi is shown giving a talk during the Industry Session of the International Symposium on Grid Computing (ISGC 2008), 11 April 2008, Academia Sinica, Taipei, Taiwan. Photo by Raffy Saldaña (http://raffysaldana.blogspot.com)

09:00 - 09:20


"Grid and Cloud Computing: Opportunities and Challenges for e-Science"

Fabrizio GAGLIARDI
Microsoft, USA


Outline:

  • The Experience of the Grid


  • Examples beyond e-Science


  • Issues and new trends: Green Grid and Cloud Computing


  • Cost considerations


  • Conclusions


1.0 The Experience of the Grid



Grids for e-Science: a success story so far?

Grids beyond e-Science?

- Slower adoption: prefer differnt environments, tools and have different TCOs

> Intra grids, internal dedicated clusters, cloud computing

- e-Business applications

> Finance, ERP, SMEs

- Industrial applications

> Automotive, aerospace pharmaceutical, telecom

- e-Government applications


> earth observation, etc.


- Industry also demostrated interest in becoming an HPC insfrastructure provider:

> on-demand infrastructures:

a. cloud and elastic computing, pay as you go...

b. data centers: data getting more and more attention

> service hosting: outsourced integrated services

- "Pre-commercial procurement"

> reserch-industry collaboration in Europe to achieve new leading-edge products

a. example: PRACE building a PTeflop Supercomputer

e-Infrastructure in Europe

a. research network infrastructure


b. computing grid infrastructure

c. data and knowledge infrastructure

d. a series of other products

Emerging new trends: Green Grid and Pay per ... CPU/GB


The Green Grid, IBM Big Gree and other IT industry initiatives try to address current HPC limits



Cloud computing and storage in demand

Amazon EC2

Industry Session: International Symposium On Grid Computing (ISGC 2008), Taipei, Taiwan

ISGC 2008
International Symposium on Grid Computing
Academia Sinica, Taipei, Taiwan
11 April 2008 (Friday)

09:00 - 10:20 Industry Session

MOderator: Craig LEE

Speakers:

"Grid and Cloud Computing: Opportunities and Challenges for e-Science"
Fabrizio GAGLIARDI (Microsoft, USA)

"Resource Virtualization and Optimization via Grid and Cloud Computing"
Moon KIM (IBM, USA)

"On-Demand Computing Using Network.com"
Melvin KOH (Sun Microsystems, Inc., Singapore)

Wednesday, April 9, 2008

Grid Activities In Asia Pacific II: International Symposium on Grid Computing (ISGC 2008), Taipei, Taiwan

Grid Activities in Asia Pacific II
ISGC 2008, Taipei, Taiwan
10 April 2008 (Thursday)

Chair: Simon C. LIN (Academia Sinica, Taiwan)

Speakers:

"Australia's National Infrastructure for Research"
Markus BUCHORN (ANU, Australia) (Remotely)

"Grid Opeartion at Tokyo Tier-2 Center for Atlas"
Hiroyuki MATSUNAGA (University of Tokyo, Japan)

"In vitro Validation of Virtual Screening Method Using HEalth GRID for the Development of Neurominidase Inhibitor"
Young-Min KIM, Doman KIM (CNU, Korea)

"Water Resource Data GRID of Thailand"
Royol CHITRADON (HAII, Thailand)

The Academic Grid (A-Grid), A Learning Grid for Malaysia: Motivation and Future Plans"
Suhaimi NAPIS (Universiti Putra Malaysia)

"Grid Activities in China"
Gang CHEN (Chinese Academy of Science, China)

"Grid Computing for Health and Evironment: Experiences and Perspectives in the Philippines"
Rafael SALDAÑA (Ateneo de Manila University, Philippines)

"IOT-HCM System and Grid Activities in Vietnam"
Tan Van LANG (Institute of Information Technology, Vietnam)

Group Photo: International Symposium on Grid Computing (ISGC 2008), Taipei, Taiwan


Photo Caption: Photo of the Group Photo taken on April 9, 2008 in Academia Sinica, Taipei, Taiwan on the occassion of the International Symposium on Grid Computing (ISGC 2008).



Tuesday, April 8, 2008

EUAsiaGrid Kick-off Meeting: More Photos (From Yannick Legre)

Click on the following link:

http://gallery.healthgrid.org/main.php?g2_itemId=7297

to view the photos.

EUAsiaGrid Kick-off Meeting - Taipei - 8th-9th April 2008

All EUAsiaGrid members are allowed to use and reproduce these photos for the purpose of the EUAsiaGrid project according that individual recognizable on each photo give explicit publishing rights.

For non-EUAsiaGrid project's member you shall request explicit usage rights by sending an email to disseminate(at)healthgrid.orgPlease, when publishing photos always mention:courtesy of Yannick Legré - www.healthgrid.org (c) 2008or courtesy of www.healthgrid.org (c) 2008

Opening Session: International Symposium On Grid Computing, Taipei, Taiwan


International Conference Hall
Academia Sinica
Taipie, Taiwan
9 April 2008 (Wedensday)
INTERNATIONAL SYMPOSIUM ON GRID COMPUTING
OPENING SESSION

08:30
Registration

09:00~10:00

Opening Remarks:

Chao-Han LIU, Vice President, Academia Sinica, TW
Maw-Kuen WU, Director, Institute of Physics, Academia Sinica, TW

Keynote Speech: Conflicts and Synergies Between Academia and Industry
Craig LEE, The Aerospace Corporation, US


10:00~10:30
Group Photo & Coffee Break

10:30~12:30

Grid Activities in Asia Pacific I

Chairs: Marco PAGANONI, INFN, IT

Speakers:

High Energy Physics Related GRID Activity in India
Atul GURTU, TIFR, ID

e-Science Infrastructure and Applications in Taiwan
Eric YEN, ASGC, TW

K e-Science: Korea Science Gateway
Beob Kyun KIM, Soonwook HWANG, KISTI, KR
Glenn MOLONEY, University of Melbourne, AU(Cancelled)

ThaiGrid: From Infrastructure to Services and Beyond
Piyawut SRICHAIKUL, NECTEC, TH
Putchong Uthayopas, ThaiGrid, TH

KnowledgeGRID Malaysia: The Next Journey of Malaysia’s National Grid Computing Initiative Luke Jing YUAN, MIMOS, MY

Grid Activities at KEK and Future Plans
Takashi SASAKI, KEK, JP

Background on the EUAsia Grid Project


The Grid and High Performance Computing Research Group, School of Science and Engineering, Ateneo de Manila University is now part of a European Commission 7th Framework Programme -- Research Infrastructures-Capacities (FP7) approved project.

Below are the details:

Project Title: EUASIAGRID - Towards a common e-Science infrastructure for the European and Asian Grids

Over-all Project Leader: Prof. Marco Paganoni, Instituto Nazional di Fisica Nucleare, Milan, Italy

Project Leader for Ateneo de Manila University: Dr. Rafael Saldaña

Project Members:

1. Instituto Nazionale di Fisica Nucleare (Italy)
2. CESNET, z.s.p.p. (Czhech Republic)
3. University of Manchester (United Kingdom)
4. HealthGrid (France)
5. Ateneo de Manila University (Philippines)
6. The Australian National University (Australia)
7. Academica Sinica (Taiwan)
8. Advanced Science and Technology Institute (Philippines)
9. Hydro and Agro Informatics Institute (Thailand)
10. Infocomm Development Authority (Singapore)
11. Ho Chi Minh City Institute of Information Technology (Vietnam)
12. Institute of Technology of Bandung (Indonesia)
13. National Electronics and Computer Technology Center (Thailand)
14. Universiti Putra Malaysia (Malaysia)
15. MIMOS Berhard (Malaysia)

Abstract:

The EUAsiaGrid project contributes to the aims of the EU Research Infrastructure FP7 Programme by "promoting international interoperation between similar infrastructures with the aim of reinforcing the global relevance and impact of European e-Infrastructure."

The project's main goal will be to pave the way towards an Asian e-Science Grid Infrastructure, in synergy with the other European Grid inititiatives in Asia, namely EGEE-III via its Asia Federation, and both the EUChina GRID and EU-IndiaGRID projects and their eventual follow on efforts. Taking advantage fo the existing global Grid technologies, with the specific emphasis on the European experience with the gLite middleware and applications running on top of it, the project plans to to encourage federating approaches across scientific disciplines and communities. EUAsiaGrid will act as a support action, aiming to define and implement a policy to promote the gLite middleware developed within the EU EGEE project across Asian copuntries. Its main actions will be to spread disemination, provide training, support scientifica applications and monitor the results.

Project Launch: We (the EUAsiaGrid Partners) will have a kick-off meeting in Academica Sinica, Taipei, Taiwan on April 7-11, 2008 during the International Symposium on Grid Computing 2008 (http://www2.twgrid.org/event/isgc2008/ ). I will participate in the Symposium as an invited speaker and give a presentation on our experiences on biomedical applications of Grid Computing.

Our cluster system administrator Allan Espinosa will join me in the project launch in Taiwan.

By:

Rafael Saldaña, Ph.D.
Coordinator
Grid and High Performance Computing Research Group
School of Science and Engineering
Ateneo de Manila University
Loyola Heights, Quezon City 1108
PHILIPPINES
Tel./Fax.: +63 2 4266125
E-mail: raffysaldana@gmail.com
BLOG: http://raffysaldana.blogspot.com/

Monday, April 7, 2008

APGRID Meeting In ISGC 2008 (Taipei, Taiwan)

Links:

http://www.apgrid.org


http://www.apgridpma.org/meetings/index.html

4th APGrid PMA Meeting
Academia Sinica, Taipei, Taiwan

April 8, 2008


This F2F meeting is co-located with ISGC 2008 event.


ASGC TWGrid

Registration

The plenary session is open for everyone. The other sessions of the meeting is closed to IGTF members. Registration is required through the ISGC 2008 registation web site. All participants are strongly encouraged to participate in ISGC 2008 event.

Accommodation
Information of your accomodation is also available on the ISGC 2008 web site.

Transportation
Transportation services between the recommended hotels (Howard Plaza, etc.) and the meeting venue will be provided.

Visa information

If you need visa, you will be helped by ISGC 2008 organizer. You can request supporting documents for visa through the registration process.

Agenda (tentative)
Plenary Session (open for everyone)
09:00 - 09:10

Welcome address (Eric Yen, Academia Sinica)
09:10 - 09:20

Self Introduction of participants
09:20 - 09:50

Examination for accreditation of a CA (1)

PRAGMA-UCSD CA (Cindy Zheng)
CP/CPS
slides

09:50 - 10:10

Opening remarks including updates of APGridPMA (Yoshio Tanaka, AIST) [slides]

10:10 - 10:30

Updates of EUGrid PMA (David Groep, NIKHEF)

Coffee/Tea Break

10:30 - 11:00

Coffee/tea breakClosed Session (1)

11:00 - 11:20

Updates of TAGPMA (Doug Olson, LBL)

11:20 - 11:50

Examination for accreditation of a CA (2)

NGO/Netrust CA (Jon Lau and Foo Jong Ai)

CP/CPS slides

11:50 - 12:10

Next F2F meeting

chair election

ML

AOB Lunch Break

12:10 - 13:30
Lunch break, PGP and Thawte Key Signing Party

Closed Session (2)

13:30 - 14:00

Examination for accreditation of a new CA (3)

NCHC CA (Weicheng Whuang)

CP/CPS slides

14:00 - 14:30

Beief status reports from member CAs

APAC

CNIC

IHEP

KEK

New CP/CPS

New Profile

Changes on CP/CPS

New enrollment manual

KISTI

NAREGI

NECTEC

THAI

14:30 - 15:00

In-depth report of self-auditing (1)

AIST

slides

Coffee/Tea Break

15:00 - 15:30

Coffee/Tea breakClosed Session (3)

15:30 - 16:00

In-depth report of self-auditing (2)

ASGCC

New CP/CPS

slides

Audit Results

16:00 - 16:30

Distributed sponsorship based ID vetting (Doug Olson)

16:30 - 17:00

AOB, Summary and closing

Sunday, April 6, 2008

YAIM Overview (Tutorial Session, International Symposium On Grid Computing 2008, Taipei, Taiwan)


NOTES on the EGEE Tutorial, 7 April 2008, Academia Sinica, Taipei, Taiwan.


http://quattor.grid.sinica.edu.tw/UI_practical.html

Topic: YAIM Introduction


  • How to Begin

  • Install a node

  • Configure a node


YAIM = Yet Another Installation Manage
Developed by EGEE SA3 team


This tutorial will guide you through the process of installing a User Interface (UI). In particular we will install a TAR UI which is installed into your own home directory and does not require root permission. The standard UI installation will require root permissions, but will allow all users to access UI commands. For this tutorial we will use the Yaim Tutorial Server. Please refer to the tutorial handout sheet for server and account details.


1. Installing the UI TAR
Install the UI_TAR packages
Configure the UI

2. Preparing your UI environment
Configure the Grid Environment
Install your user certificate

3. Test the Grid jobs submission by your UI
Query the Grid Computing Environment
Simple job submission
Submitting jobs by the Resource Broker
Query the job status
Get your job results

4. Test the Grid data stor by your UI
Query the Grid Storage Environment
Set the DPNS HOST
Create directory on diskpool
Put your file into diskpool
Down file from diskpool

Installing the UI TAR

1. Please make sure the following file is already into your home directory
[taipei01@t-yaim~]$ ls -1F certificates/gLite/glite-UI-3.1.8-0-external.tar.gzglite-UI-3.1.8-0.tar.gzjobs/site-info.def.isgc2008
You can also find the last packages by the following link:The relocatable UI
Notice: The PPS is the pre-production packages, that sometime have several new features, but might also have some bugs, If you are not certainty to use the new features, we recommend you to use the production packages.
To install the UI_TAR, you have only to untar the UI tar ball in your own directory.
2. Untar the tar balls
[taipei01@t-yaim~]$ tar -xzf glite-UI-3.1.8-0-external.tar.gz -C gLite [taipei01@t-yaim~]$ tar -xzf glite-UI-3.1.8-0.tar.gz -C gLite
3. Change the work directory and check the installed files[taipei01@t-yaim gLite]$ cd gLite[taipei01@t-yaim gLite]$ ls -Fclassads/ edg/ external/ globus/ lcg/d-cache/ etc/ glite/ gpt/ tmp.31683/[taipei01@t-yaim gLite]$
4. Run the yaim script to configure the UI_TAR. Here we use the -c "configure command" to configure the UI. The configuration has already been completed for you in site-info.def. Please take a look inside the file to get an idea of how to fill in the yaim parameters. This particular site-info.def allows you to configure a UI that uses the gilda grid infrastructure.[taipei01@t-yaim gLite]$./glite/yaim/bin/yaim -c -s ~/site-info.def.isgc2008 -n UI_TAR
You shouldn't get any error messages.
Notice:Please pay attention to the X509_CERT_DIR of site-info.def variable, here we used "/etc/grid-security/certificates/", if you have not root permission and your computer never installed any certificates, you should modify the X509_CERT_DIR to fit your own directory, the yaim script will go to install all the certificates into this directory.For example:If you have specifyX509_CERT_DIR=$HOME/gLite/external/etc/certificatesin your site-info.def,The yaim script will install all the certificates into $HOME/gLite/external/etc/certificatesHere we were already installed gilda certificates into /etc/grid-security/certificates/ for this tutorial, so please don't modify the X509_CERT_DIR in this practical anyway.
Preparing your UI environment
5. Setup the environment. UI tar package contains two environment scripts that must be sourced in order to use the UI client tools. Here we add these scripts to your startup script, that can help to auto configure the UI environment every time you login the shell.[taipei01@t-yaim gLite]$ echo 'source $HOME/gLite/external/etc/profile.d/grid-env.sh' >>~/.bashrc
Now, you can re-login to the shell or just running following command:[taipei01@t-yaim gLite]$ source ~/.bashrc
6. Put your user certificate and private key into ~/.globus. After you obtain your certificate from your CA, you will need to install them on an UI in the .globus directory.The commands below show you how this is done. Pay close attention to the permission of these certificates.[taipei01@t-yaim gLite]$cd ~[taipei01@t-yaim ~]$ mkdir .globus[taipei01@t-yaim ~]$ chmod 700 .globus[taipei01@t-yaim ~]$ cp certificates/TAIPEIxx-cert.pem .globus/usercert.pem[taipei01@t-yaim ~]$ cp certificates/TAIPEIxx-key.pem .globus/userkey.pem[taipei01@t-yaim ~]$ ls .globus/usercert.pem userkey.pem[taipei01@t-yaim ~]$ chmod 644 .globus/usercert.pem[taipei01@t-yaim ~]$ chmod 400 .globus/userkey.pem
The following step is only for this tutorial that will add gilda vo certificate into your own UI environment [taipei01@t-yaim ~]$ cp /opt/gilda-voms/gilda-voms.ct.infn.it ~/gLite/external/etc/grid-security/vomsdir/
7. Create a proxy certificate.
[taipei01@t-yaim ~]$ voms-proxy-init -voms gildaEnter GRID pass phrase: Your identity: /C=IT/O=GILDA/OU=Personal Certificate/L=TAIPEI/CN=TAIPEI01/Email=jennsu@ccweb.sinica.edu.twCreating temporary proxy ...................................... DoneContacting voms.ct.infn.it:15001 [/C=IT/O=INFN/OU=Host/L=Catania/CN=voms.ct.infn.it] "gilda" DoneCreating proxy ........................................................ Done Your proxy is valid until Fri Mar 26 21:56:48 2008
Congratulations, you have now configured and setup a Grid User Interface environment that is required to access the Grid resources. We will now test your environment by performing simple job submission and data management task.
Test the grid jobs submission by your UI
8. Check which CE are available on for gilda Virtual Organization with lcg-infosites:[taipei01@t-yaim ~]$ lcg-infosites --vo gilda ce
valor del bdii: grid004.ct.infn.it:2170
#CPU Free Total Jobs Running Waiting ComputingElement
----------------------------------------------------------
11 11 0 0 0 grid-ce.bio.dist.unige.it:2119/jobmanager-lcglsf-gilda
10 10 0 0 0 grid011f.cnaf.infn.it:2119/jobmanager-lcgpbs-gilda
34 34 0 0 0 grid010.ct.infn.it:2119/jobmanager-lcgpbs-long
34 34 0 0 0 grid010.ct.infn.it:2119/jobmanager-lcgpbs-short
34 34 0 0 0 grid010.ct.infn.it:2119/jobmanager-lcgpbs-infinite
56 46 2 2 0 iceage-ce-01.ct.infn.it:2119/jobmanager-lcgpbs-short
56 46 1 1 0 iceage-ce-01.ct.infn.it:2119/jobmanager-lcgpbs-long
56 46 0 0 0 iceage-ce-01.ct.infn.it:2119/jobmanager-lcgpbs-infinite
10 10 0 0 0 grid004.iucc.ac.il:2119/jobmanager-lcgpbs-short
10 10 0 0 0 grid004.iucc.ac.il:2119/jobmanager-lcgpbs-long
10 10 0 0 0 grid004.iucc.ac.il:2119/jobmanager-lcgpbs-infinite
16 16 0 0 0 gn0.hpcc.sztaki.hu:2119/jobmanager-lcgpbs-gilda
9.Test the CE by submitting a simple job that runs directly on the CE itself:[taipei01@t-yaim ~]$ globus-job-run grid011f.cnaf.infn.it /bin/hostname
grid011f.cnaf.infn.it
Make sure you have a correct output which is the hostname of the CE.
10. Test job submission through a resource broker:
Edit a jdl file first[taipei01@t-yaim ~]$ cd jobs/
[taipei01@t-yaim jobs]$ ls
edglog.log testJob.jdl testJob.sh
[taipei01@t-yaim jobs]$ vim testJob.jdl
* Please add following contents in to the testJob.jdl:
Executable = "testJob.sh";
StdOutput = "testJob.out";
StdError = "testJob.err";
InputSandbox = {"./testJob.sh"};
OutputSandbox = {"testJob.out","testJob.err"};
VirtualOrganisation = "gilda";
Feel free to modify the JDL and specify your job requirements.
Edit testJob.sh[taipei01@t-yaim jobs]$ vim testJob.sh
#!/bin/bash
date
hostname
echo "****************************************"
echo "env sort"
echo "****************************************"
env sort
echo "****************************************"
echo "mount"
echo "****************************************"
mount
date
11. Check which CEs match your JDL requirements.
usage: edg-job-list-match
[taipei01@t-yaim jobs]$ edg-job-list-match testJob.jdl
Selected Virtual Organisation name (from JDL): gilda
Connecting to host glite-rb.ct.infn.it, port 7772
***************************************************************************
COMPUTING ELEMENT IDs LIST
The following CE(s) matching your job requirements have been found:
*CEId*
ce-nano-37.to.infn.it:2119/jobmanager-lcgpbs-infinite
ce-nano-37.to.infn.it:2119/jobmanager-lcgpbs-long
ce-nano-37.to.infn.it:2119/jobmanager-lcgpbs-short
dgt01.ui.savba.sk:2119/jobmanager-lcgpbs-infinite
dgt01.ui.savba.sk:2119/jobmanager-lcgpbs-long
dgt01.ui.savba.sk:2119/jobmanager-lcgpbs-short
gilda-ce-01.pd.infn.it:2119/jobmanager-lcgpbs-infinite
gilda-ce-01.pd.infn.it:2119/jobmanager-lcgpbs-long
gilda-ce-01.pd.infn.it:2119/jobmanager-lcgpbs-short
gilda01.ihep.ac.cn:2119/jobmanager-lcgpbs-gilda
gn0.hpcc.sztaki.hu:2119/jobmanager-lcgpbs-gilda
grid010.ct.infn.it:2119/jobmanager-lcgpbs-infinite
grid010.ct.infn.it:2119/jobmanager-lcgpbs-long
grid010.ct.infn.it:2119/jobmanager-lcgpbs-short
iceage-ce-01.ct.infn.it:2119/jobmanager-lcgpbs-short
iceage-ce-01.ct.infn.it:2119/jobmanager-lcgpbs-infinite
iceage-ce-01.ct.infn.it:2119/jobmanager-lcgpbs-long
***************************************************************************
12. Submit the test job:
usage: edg-job-submit [taipei01@t-yaim jobs]$ edg-job-submit testJob.jdl
Selected Virtual Organisation name (from JDL): gilda
Connecting to host glite-rb.ct.infn.it, port 7772
Logging to host glite-rb.ct.infn.it, port 9002
*********************************************************************************************
JOB SUBMIT OUTCOME
The job has been successfully submitted to the Network Server.
Use edg-job-status command to check job current status. Your job identifier (edg_jobId) is:
- https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
*********************************************************************************************
* Notice, please remember your job id, in this case the job id is:
"https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA"
Get the job status:
usage: edg-job-status [taipei01@t-yaim jobs]$ edg-job-status https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
Current Status: Scheduled
Status Reason: Job successfully submitted to Globus
Destination: gilda-ce-01.pd.infn.it:2119/jobmanager-lcgpbs-infinite
reached on: Fri Oct 26 13:22:35 2007
*************************************************************
Check the status until the “Current Status” changes to "Done"[taipei01@t-yaim jobs]$ edg-job-status https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
*************************************************************
BOOKKEEPING INFORMATION:
Status info for the Job : https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
Current Status: Done (Success)
Exit code: 0
Status Reason: Job terminated successfully
Destination: gilda-ce-01.pd.infn.it:2119/jobmanager-lcgpbs-infinite
reached on: Fri Oct 26 13:28:08 2007
*************************************************************
12. Download the job results from the Resource Broker to your User Interface[taipei01@t-yaim jobs]$ edg-job-get-output https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
Retrieving files from host: glite-rb.ct.infn.it ( for https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA )
*********************************************************************************
JOB GET OUTPUT OUTCOME
Output sandbox files for the job:
- https://glite-rb.ct.infn.it:9000/js8FEQjvTiVDaIPwQhWqMA
have been successfully retrieved and stored in the directory:
/home/taipei01/jobOutput/taipe01_js8FEQjvTiVDaIPwQhWqMA
*********************************************************************************
The result output path was define in site-info.def the OUTPUT_STORAGE variable, for this practical, the OUTPUT_STORAGE is $HOME/jobOutput/.
so the result will put into $HOME/jobOutput/taipei01_js8FEQjvTiVDaIPwQhWqMA
Check the result:[taipei01@t-yaim jobs]$ less ~/jobOutput/camp_js8FEQjvTiVDaIPwQhWqMA/testJob.out
Test the Grid data store by your UI
13. Get SE information:[taipei01@t-yaim gLite]$ lcg-infosites --vo gilda se
Avail Space(Kb) Used Space(Kb) Type SEs
----------------------------------------------------------
32350000 210590 n.a grid-se.bio.dist.unige.it
74980000 5153576 n.a egee016.cnaf.infn.it
321010000 50293604 n.a aliserv6.ct.infn.it
50660000 7340000 n.a iceage-se-01.ct.infn.it
884662792 27744624 n.a grid005.iucc.ac.il
100120000 30 n.a fn2.hpcc.sztaki.hu
14. Set your DPNS_HOST:[taipei01@t-yaim jobs]$ export DPNS_HOST=grid-se.bio.dist.unige.it
Here we use the "grid-se.bio.dist.unige.it" for dpns host, you can feel free to select any listed one, but please remember to modify the domain name in following exercise.For example, if you use "egee016.cnaf.infn.it" for DPNS_HOST, your dpm home should be "/dpm/cnaf.infn.it/home/gilda/"
15. Create your own directory:[taipei01@t-yaim jobs]$ dpns-mkdir /dpm/bio.dist.unige.it/home/gilda/taipeixx
[taipei01@t-yaim jobs]$ dpns-ls /dpm/bio.dist.unige.it/home/gilda/
taipeixx
generated
sh_copy
16. Generate a file:[taipei01@t-yaim jobs]$ echo 'hello!! just a test'> data
17. Put file to SE:[taipei01@t-yaim jobs]$ globus-url-copy file://$HOME/jobs/data gsiftp://grid-se.bio.dist.unige.it/dpm/bio.dist.unige.it/home/gilda/taipeixx/
18. Check file:[taipei01@t-yaim jobs]$ dpns-ls /dpm/bio.dist.unige.it/home/gilda/taipeixx/
data
19. Delete local file:[taipei01@t-yaim jobs]$ rm data
20. Download the file from the Storage Element back to the User Interface:[taipei01@t-yaim jobs]$ globus-url-copy gsiftp://grid-se.bio.dist.unige.it/dpm/bio.dist.unige.it/home/gilda/camp/data file://$HOME/jobs/
[taipei01@t-yaim jobs]$ cat data
hello!! just a test
21. Finish

International Symposium on Grid Computing 2008, Taipei, Taiwan: Tutorial on EGEE and gLite

http://homepages.nesc.ac.uk/~mjm/NA3ETF/Usage%20of%20lcg-infosites%20and%20lcg-info.htm

The aim of this practical is to gain an understanding of the Information System by exploring the GILDA grid. This will be done by the use of the "lcg-infosites" and "lcg-info" commands.


Instructions:

1. Use putty
2. Login to the Yaim Tutorial Server:
3. Enter User Name
4. Enter Password
5. Enter Certificate Password

LGC-Infosites

The "lcg-infosites" command is actually just a perl script wrapping a series of LDAP commands and was developed to allow the user to retrieve information on Grid resources for the most common cases.

Before beginning it is worth observing that "lcg-infosites" does not use your VOMS proxy certificate and hence all commands need to include the option "--vo gilda" (note that you can actually query the information for any VO supported by GILDA).

Start by getting a list of the compute elements available in the gilda VO and the state of the associated CPU's:

lcg-infosites --vo gilda ce

Note: Follow the details indicated in the tutorial page with the following link:

http://homepages.nesc.ac.uk/~mjm/NA3ETF/Usage%20of%20lcg-infosites%20and%20lcg-info.htm

Tutorial Page Link: http://indico.cern.ch/conferenceDisplay.py?confId=31719

International Symposium on Grid Computing 2008, Day 1 (Tutorial), Taipei, Taiwan




April 7, 2008 (Monday)

From the Howard Plaza Hotel a shuttle service took us to the Academia Sinica. Travel time is around 1 hour due to morning rush hour traffic in Taipei.

The tutorial session started a bit late.

Sessions and Notes:

8:30 a.m. Registration

09:00 - 09:30 gLite Introduction & Security

09:30 - 10:00 Information System and Practice Session

10:00 - 10:45 Work Load Management & Simple Job Submission Practical

10:45 - 11:15 Coffee Break

11:15 - 12:00 Data Management

12:00 - 12:45 Yaim & (UI TAR installation) Practical

12:45 - 14:00 LUNCH (Lecture Hall)

14:00 - 14:30 Grid Application Introduction

14:30 - 15:50 Posting an application to the EGEE Grid Practical

15:50 - 16:20 Coffee Break

16:20 - 17:40 Data Grid Services/SRB/SRM & Practical